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Genome sequence of the biocontrol strain Pseudomonas fluorescens F113.

dc.contributor.authorRedondo-Nieto, Miguel
dc.contributor.authorBarret, Matthieu
dc.contributor.authorMorrissey, John P.
dc.contributor.authorGermaine, Kieran J.
dc.contributor.authorMartinez-Granero, Francisco
dc.contributor.authorBarahona, Emma
dc.contributor.authorNavazo, Ana
dc.contributor.authorSánchez-Contrerasa, María
dc.contributor.authorMoynihan, Jennifer A.
dc.contributor.authorGiddens, Stephen R.
dc.contributor.authorCoppoolse, Eric R.
dc.contributor.authorCandela, Muriel
dc.contributor.authorStiekema, Willem J.
dc.contributor.authorRainey, Paul B.
dc.contributor.authorDowling, David N.
dc.contributor.authorO'Gara, Fergal
dc.contributor.authorMartína, Marta
dc.contributor.authorRivilla, Rafael
dc.date.accessioned2018-08-16T08:06:27Z
dc.date.available2018-08-16T08:06:27Z
dc.date.copyright2011-12-19
dc.date.issued2012
dc.identifier.citationRedondo-Nieto, M., Barret, M., Morrisey, J. P., Germaine, K., Martinez-Granero, F., Barahona, E., . . . Rivilla, R. (2012). Genome sequence of the biocontrol strain Pseudomonas fluorescens F113. Journal of Bacteriology, 194(5), 1273-1274. doi:10.1128/jb.06601-11en_US
dc.identifier.issn1098-5530.
dc.identifier.urihttps://research.thea.ie/handle/20.500.12065/2327
dc.description.abstractPseudomonas fluorescens F113 is a plant growth-promoting rhizobacterium (PGPR) that has biocontrol activity against fungal plant pathogens and is a model for rhizosphere colonization. Here, we present its complete genome sequence, which shows that besides a core genome very similar to those of other strains sequenced within this species, F113 possesses a wide array of genes encoding specialized functions for thriving in the rhizosphere and interacting with eukaryotic organisms.en_US
dc.formatPDFen_US
dc.language.isoenen_US
dc.publisherAmerican Society for Microbiologyen_US
dc.relation.ispartofJournal of Bacteriologyen_US
dc.rightsAttribution-NonCommercial-NoDerivs 3.0 Ireland*
dc.rights.urihttp://creativecommons.org/licenses/by-nc-nd/3.0/ie/*
dc.subjectPseudomonas fluorescens F113en_US
dc.titleGenome sequence of the biocontrol strain Pseudomonas fluorescens F113.en_US
dc.typeArticleen_US
dc.contributor.sponsorSequencing of this genome has been funded by grants MICROAMBIENTE-CM (to R.R.), BIO2009-08254 (to M.M.), 08/GEN/ 1319 (to J.P.M.), TSR 3 (Agribibiotics project) (to D.D.), and Marie Curie MIGENOF113 (to M.S.-C. and R.R.). This research was supported in part by grants awarded to F.O. by the Science Foundation of Ireland (07/IN.1/B948, 08/RFP/GEN1295, 08/RFP/GEN1319, and SFI09/RFP/BMT2350), by the Department of Agriculture, Fisheries and Food (RSF grants 06-321 and 06- 377 and FIRM grants 06RDC459, 06RDC506, and 08RDC629), and by the European Commission (MTKD-CT2006-042062, Marie Curie TOK: TRAMWAYS, EU256596), IRCSET (05/EDIV/FP107/INTERPAM, EMBARK), the Marine Institute Beaufort award (C&CRA 2007/082), the Environmental Protection Agency (EPA 2006-PhD-S-21 and EPA 2008- PhD-S-2), and the HRB (RP/2006/271, RP/2007/290, and HRA/2009/146). We also acknowledge the Centro de Computación Científica in Universidad Autónoma de Madrid for providing the computing facilities used in the assembly process.en_US
dc.description.peerreviewyesen_US
dc.identifier.urlhttp://dx.doi.org/10.1128/jb.06601-11en_US
dc.rights.accessinfo:eu-repo/semantics/openAccessen_US
dc.subject.departmentenviroCORE - IT Carlowen_US


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Except where otherwise noted, this item's license is described as Attribution-NonCommercial-NoDerivs 3.0 Ireland